Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916966.1_cds_XP_016466626.1_59460
CDS Infomation

[gene=LOC107789345] [db_xref=GeneID:107789345] [protein=probable sucrose-phosphate synthase 4] [exception=annotated by transcript or proteomic data] [protein_id=XP_016466626.1] [location=join(51860..52150,52890..52979,53276..53499,53645..53708,53983..54182,54306..54786,54879..55007,55213..55344,55435..55611,56246..56299,56387..56449,56766..>57083)] [gbkey=CDS]
Sequence

ATGGCGGAGAATGAATGGTTAAACGGGTATTTGGAGGCAATATTGGACGCGGGGACTGAT
AGAAATGGGTCGACAAAGAAAGAACGTAGAGCTGCAAGTATTGAAGACAAAAGCAGCTTT
AAGAATACTAGTGTGAGGAATAATAATAATAAAATAGAGGAAACGTTGAGGTTTGAGAAG
TTTGAAATCCAGAAAGAGAAGGCAGAGAAGCTGTTTAGTCCCACTACCTACTTTGTTGAA
GAAGTTGTCAATAGCTTTGATGAGTCTGATCTCCACAAGGCTTGGATCAAGGTAGTGGCA
ACAAGGAATTCTCGTGAGAGGAATAACAGGCTCGAGAATATGTGCTGGCGCATTTGGCAT
CTTGCCCGCAAGAAGAAACAGATAGCGTGGGATGATGCCCAAAAGCTAGTAATACGGAGA
CTTGAACTAGAGAAAGGTCGTTTTGACGCATTAGATGATCTTTCTGAACTTTCAGAAGGT
GAGAAGGAGAAAACAGATAATGTAAATACATCAGATTCTCACCATGTCATATCAAGGATT
AATTCAGTTACTCAGATGTGGCCTGATGAAGATAAACCAAGGCAACTTTACATTGTCTTG
ATCAGTATCCATGGGTTGGTGCGTGGAGAAAACATGGAACTCGGACGAGATTCTGACACT
GGTGGTCAGGTGAAGTATGTAGTAGAACTTGCTCGAGCACTTGCAAACATGGAAGGAGTT
CATCGAGTTGACCTCCTGACTCGACAGATCACATCTCCAGAGGTTGACTCTAGCTATGGT
GAGCCAATTGAGATGCTCTCATGCCCATCTGATGCTTTTGGAAGCTGTGGTGCCTACATA
GTTCGAATCCCCTGCGGACCACGTGATAAGTACATTCCAAAAGAATCACTCTGGCCTTAC
ATACCAGAATTTGTTGATGGGGCATTAAGCCACATTGTGAATATGGCAAGAGCTATGGGG
GAGCAAGTCAATGCTGGAAAAGCAGTATGGCCTTATGTGATTCATGGGCATTATGCTGAT
GCAGGAGAGGTAGCAGCTCGCTTGTCTGGAACCTTAAATGTACCAATGGTGCTAACGGGG
CACTCGTTAGGAAGGAACAAGTTCGAGCAATTGCTTAAACAGGGCAGACTAACTAAGGAA
GACATAAATACCACCTATAAGATACTGAGGAGAATAGAAGGAGAAGAGTTGGGACTTGAT
GCCGCTGAAATGGTGGTAACTAGCACAAAGCAAGAGATTGATGAACAATGGGGTTTGTAT
GATGGTTTTGATATTCAGTTGGAGAGGAAACTCAGAGTTAGGAGACGGAGAGGAGTCAGT
TGCCTCGGAAGATACATGCCCAGGATGGTGGTTATACCACCAGGGATGGATTTCAGCAAC
GTGAACGCGCAAGATTTGTTGGAAGGTGATGGAGATCTCAAGTCATTAATTGGTACAGAC
AAAAGTCAAAAGAGACCTATACCATATATATGGTCTGAGATCATGCGATTCTTCGTTAAC
CCTCACAAGCCTATGATACTTGCACTGTCACGTCCAGATCCTAAGAAGAATGTAACTACT
TTGCTCAGGGCTTTCGGAGAATGTCAAGCACTTCGAGAACTAGCCAACTTGACACTGATC
CTAGGTAACAGAGATGACATTGATGACATGTCCAGTAGCAGCTCTGCAGTACTCACAACA
GTAATAAAGCTCATTGACAAGTACAATTTGTACGGTCAGGTGGCATATCCAAAGCATCAT
AAGCAACCAGATGTTCCTGATATATATCGTCTGGCTGCAAAAACTAAGGGAGTATTCATC
AATCCGGCTCTTGTTGAGCCATTCGGCCTCACTCTTATTGAGGCAGCTGCTTATGGTTTG
CCTATAGTTGCTACCAAAAATGGAGGGCCGGTGGATATACTTAAGGCACTAAACAATGGG
CTACTCATTGATCCACATGATCAAAAAGCCATAGCAGACGCTCTTCTAAAGCTTGTTGCT
GACAAGAACCTATGGCTGGAGTGCCGTAAAAATGGCCTAAAGAATATCCACCGTTTCTCA
TGGCCAGAGCACTGCCGGAATTACCTCTCCCATGTTCAACACTGCAGAAATCGCCACCCT
GCCAATCGTCTTAAGGTCATGAAGCCAACTCTTGAAGAACCTATGAGTGAATCACTAAGG
GATGTTGAAGACCTTTCTCTTAAGTTTTCCATTGATGTGGACTTCAAAGCCAATGGGGAG
CTT

Peptide Sequence

PEP ID

XP_016466626.1
PEP Infomation

PREDICTED: probable sucrose-phosphate synthase 4 [Nicotiana tabacum]
Sequence

MAENEWLNGYLEAILDAGTDRNGSTKKERRAASIEDKSSFKNTSVRNNNNKIEETLRFEK
FEIQKEKAEKLFSPTTYFVEEVVNSFDESDLHKAWIKVVATRNSRERNNRLENMCWRIWH
LARKKKQIAWDDAQKLVIRRLELEKGRFDALDDLSELSEGEKEKTDNVNTSDSHHVISRI
NSVTQMWPDEDKPRQLYIVLISIHGLVRGENMELGRDSDTGGQVKYVVELARALANMEGV
HRVDLLTRQITSPEVDSSYGEPIEMLSCPSDAFGSCGAYIVRIPCGPRDKYIPKESLWPY
IPEFVDGALSHIVNMARAMGEQVNAGKAVWPYVIHGHYADAGEVAARLSGTLNVPMVLTG
HSLGRNKFEQLLKQGRLTKEDINTTYKILRRIEGEELGLDAAEMVVTSTKQEIDEQWGLY
DGFDIQLERKLRVRRRRGVSCLGRYMPRMVVIPPGMDFSNVNAQDLLEGDGDLKSLIGTD
KSQKRPIPYIWSEIMRFFVNPHKPMILALSRPDPKKNVTTLLRAFGECQALRELANLTLI
LGNRDDIDDMSSSSSAVLTTVIKLIDKYNLYGQVAYPKHHKQPDVPDIYRLAAKTKGVFI
NPALVEPFGLTLIEAAAYGLPIVATKNGGPVDILKALNNGLLIDPHDQKAIADALLKLVA
DKNLWLECRKNGLKNIHRFSWPEHCRNYLSHVQHCRNRHPANRLKVMKPTLEEPMSESLR
DVEDLSLKFSIDVDFKANGELDMARRQQELVEKLSRKANSISKPIISYCPGRRQVLYVVA
TDCYNSKGTPTETLSLTVKNIMQVAGSRSSQIGLVLSTGLSLDETKEALNSCPTNLEDFD
ALICSSGSEIYYPWRDFGLDEDYEAHIEYRWAGENIKSAVMRLGKHEEGSEHDITQCSSA
CSSRCYSYSITPGAKVPKVNDLRQRLRMRGFRCSVIYTHAASRLNVTPLFASRSQALRYL
SVRWGVDLSSMVVFVGEKGDTDYEGLLVGLHKTVILKGSVEYASEMLLHNEDSFRTDDVV
PRDSTNIRAAEGYEPQDISGALEKLEVM

Transcript Sequence

Gene sequence data has not been registered.